Package: flexrsurv 2.0.18

flexrsurv: Flexible Relative Survival Analysis

Package for parametric relative survival analyses. It allows to model non-linear and non-proportional effects and both non proportional and non linear effects, using splines (B-spline and truncated power basis), Weighted Cumulative Index of Exposure effect, with correction model for the life table. Both non proportional and non linear effects are described in Remontet, L. et al. (2007) <doi:10.1002/sim.2656> and Mahboubi, A. et al. (2011) <doi:10.1002/sim.4208>.

Authors:Isabelle Clerc-Urmès [aut], Michel Grzebyk [aut, cre], Guy Hédelin [ctb], CENSUR working survival group [ctb]

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flexrsurv.pdf |flexrsurv.html✨
flexrsurv/json (API)
NEWS

# Install 'flexrsurv' in R:

install.packages('flexrsurv', repos = c('https://grzebyk.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 1 stars 3 scripts 325 downloads 16 exports 39 dependencies

Last updated 9 months agofrom:37d0c4764a. Checks:OK: 9. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Nov 06 2024
R-4.5-win-x86_64	OK	Nov 06 2024
R-4.5-linux-x86_64	OK	Nov 06 2024
R-4.4-win-x86_64	OK	Nov 06 2024
R-4.4-mac-x86_64	OK	Nov 06 2024
R-4.4-mac-aarch64	OK	Nov 06 2024
R-4.3-win-x86_64	OK	Nov 06 2024
R-4.3-mac-x86_64	OK	Nov 06 2024
R-4.3-mac-aarch64	OK	Nov 06 2024

Exports:flexrsurv flexrsurv.ll flexrsurvclt flexrsurvclt.ll getBrassPseudoHazardFromTable getHazardFromTable getPseudoHazardFromTable ndf.flexrsurvclt NLL NLLbeta NPH NPHalpha NPHNLL predictCLT predictSpline WCEI

Dependencies:cli cmprsk data.table dplyr Epi etm fansi Formula formula.tools generics glue lattice lifecycle magrittr MASS Matrix mgcv nlme numDeriv operator.tools orthogonalsplinebasis pillar pkgconfig plyr R.methodsS3 R.oo R.utils R6 Rcpp RcppArmadillo rlang statmod survival tibble tidyselect utf8 vctrs withr zoo

Help page	Topics
Package for flexible relative survival analyses	flexrsurv-package flexrsurvpackage
Fit Relative Survival Model	flexrsurv flexrsurv.ll
Fit Relative Survival Model and Correct Life Tables	flexrsurvclt flexrsurvclt.ll
Compute expected hazards with respect to a corrected reference life table	getBrassHazardFromTable getBrassPseudoHazardFromTable
computes expected hazards with respect to a reference life table	getHazardFromTable
Computes expected hazards with respect to a reference life table	getPseudoHazardFromTable
Log-Likelihood and the number of observations for a 'flexrsuv' fit.	logLik.flexrsurv nobs.flexrsurv
Non Log-Linear effect	NLL
Non Proportional Hazard effect	NPH
Non Proportional Hazard and Non Log-Linear effect	NPHNLL
Predictions for a relative survival model	predict.flexrsurv predict.flexrsurvclt
Predictions for relational life table model	predictCLT predictCLT.default predictCLT.flexrsurvclt
Generic method for prediction of spline function	predictSpline predictSpline,character,numeric-method predictSpline.character predictSpline.default
Print a Short Summary of a Relative Survival Model	print.flexrsurv
Summarizing Flexible Relative Survival Model Fits	print.summary.flexrsurv summary.flexrsurv
Weighted cumulative exposure index	WCEI

Package: flexrsurv 2.0.18

flexrsurv: Flexible Relative Survival Analysis

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Usage by other packages (reverse dependencies)